UMR Ecologie Microbienne Lyon

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Position Maître de Conférence

Profil recherche : Ecologie microbienne - thème : exposition (animale et/ou humaine) aux bactéries pathogènes opportunistes - incidence des contraintes environnementales sur la virulence.

Concours externes chargés de recherche INRA

Les microorganismes sont rarement considérés dans les études sur les liens entre biodiversité-fonctionnement-services écosystémiques. Les nouvelles approches de caractérisation de la diversité microbienne permettent d’étudier leur contribution relative à différents services écosystémiques dans un contexte de limitation des intrants et d’agro-écologie ...

Communications scientifiques

Bouri M, Gharsa HB, Vial L, Lavire C, Glick BR, Rhouma A. 2017. A simple and stable method of tagging Agrobacterium fabrum C58 for environmental monitoring. Phytopathologia Mediterranea 56: 1-9.

Hugoni M, Vellet A, Debroas D. 2017. Unique and highly variable bacterial communities inhabiting the surface microlayer of an oligotrophic lake. Aquatic Microbial Ecology 79: 115-125.

Guyonnet JP, Vautrin F, Meiffren G, Labois C, Cantarel AAM, Michalet S, Comte G, Haichar FZ. 2017. The effects of plant nutritional strategy on soil microbial denitrification activity through rhizosphere primary metabolites. FEMS Microbiology Ecology 93.

Vacheron J, Dubost A, Chapulliot D, Prigent-Combaret C, Muller D. 2017. Draft Genome Sequence of Chryseobacterium sp. JV274 Isolated from Maize Rhizosphere. Genome Announcements 5: e00122-17.

Pages-Monteiro L, Marti R, Commun C, Alliot N, Bardel C, Meugnier H, Perouse-de-Montclos M, Reix P, Durieu I, Durupt S, et al. 2017. Strong incidence of Pseudomonas aeruginosa on bacterial rrs and ITS genetic structures of cystic fibrosis sputa. PLOS ONE 12: e0173022.

Blondel C, Briset L, Legay N, Arnoldi C, Poly F, Clément J-C, Raveton M. 2017. Assessing the dynamic changes of rhizosphere functionality of Zea mays plants grown in organochlorine contaminated soils. Journal of Hazardous Materials 331: 226-234.

Simonin M, Martins JMF, Le Roux X, Uzu G, Calas A, Richaume A. 2017. Toxicity of TiO2 nanoparticles on soil nitrification at environmentally relevant concentrations: Lack of classical dose–response relationships. Nanotoxicology: 1-9.

El Moujahid L, Le Roux X, Michalet S, Bellvert F, Weigelt A, Poly F. 2017. Effect of plant diversity on the diversity of soil organic compounds. PLOS ONE 12: e0170494.

Salles JF, Pereira e Silva MC, Dini-Andreote F, Dias ACF, Guillaumaud N, Poly F, Van Elsas JD. 2017. Successional patterns of key genes and processes involved in the microbial nitrogen cycle in a salt marsh chronosequence. Biogeochemistry: 1-17.

Le Quéré A, Tak N, Gehlot HS, Lavire C, Meyer T, Chapulliot D, Rathi S, Sakrouhi I, Rocha G, Rohmer M, et al. 2017. Genomic characterization of Ensifer aridi, a proposed new species of nitrogen-fixing rhizobium recovered from Asian, African and American deserts. BMC Genomics 18: 85.

Doré J, Kohler A, Dubost A, Lindquist E, Kuo A, Grigoriev IV, Martin F, Marmeisse R, Gay G. 2017. The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation. Environmental Microbiology: n/a-n/a.

Bardon C, Poly F, Haichar FZ, Le Roux X, Simon L, Meiffren G, Comte G, Rouifed S, Piola F. 2017. Biological denitrification inhibition (BDI) with procyanidins induces modification of root traits, growth and N status in Fallopia x bohemica. Soil Biology and Biochemistry 107: 41-49.

Randriamboavonjy JI, Loirand G, Vaillant N, Lauzier B, Derbré S, Michalet S, Pacaud P, Tesse A. 2016. Cardiac Protective Effects of Moringa oleifera Seeds in Spontaneous Hypertensive Rats. American Journal of Hypertension 29: 873-881.

Rozier C, Erban A, Hamzaoui J, Prigent-Combaret C, Comte G, Kopka J, Czarnes S, Legendre L. 2016. Xylem Sap Metabolite Profile Changes During Phytostimulation of Maize by the Plant Growth-Promoting Rhizobacterium, Azospirillum lipoferum CRT1. 6: 1-10.

Lebot, V, Legendre L. 2016. Comparison of kava (<i>Piper methysticum</i> Forst.) varieties by UV absorbance of acetonic extracts and high-performance thin-layer chromatography. 48: 25-33.

Actualités

12th International Symposium on Aeromonas and Plesiomonas

It is with pleasure and privilege for the Mexican Group of Aeromonas Study to invite you to join the 12th International Symposium on Aeromonas and Plesiomonas in Hotel BRISTOL Mexico, City. The meeting will be held in the continuity of the previous Aeromonas and Plesiomonas symposium. Several topics will be reviewed such as epidemiology, pathogenesis, genomics, genetic diversity, taxonomy ecology, molecular biology and phylogeny, among others, and it will offer scientific exchanges. Our (...)

8^e Colloque du Réseau National Biofilms

L’objectif de ces journées est la mise en synergie de l’ensemble des acteurs concernés par la thématique « biofilms » (chercheurs, industriels, instituts techniques) par le biais d‘échanges scientifiques et méthodologiques.
L’édition 2017 se tiendra les 5 et 6 décembre 2017 à Clermont-Ferrand, dans les locaux des facultés de Médecine-Pharmacie. Après Toulouse en 2015, cette 8^e édition a pour objectif d’échanger sur la thématique « Biofilm (...)

15th Symposium on Aquatic Microbial Ecology

The Symposium will cover the following topics : Microbes in future aquatic environments (Response of aquatic microbial communities to environmental changes) Viruses : understanding the power of the smaller Making a living of what is available : Microbial chemoautotrophic metabolisms in aquatic environments Microbial metabolic networks in biogeochemical cycles Who does what ?strategies/suuccess stories in linking (microbial) diversity to function” Microbial behavior in aquatic systems : from (...)

IMMUNINV 2017

Nous avons le plaisir de vous annoncer que le colloque IMMUNINV 2017 se tiendra cette année à Lyon sur le campus de la Doua du 7 au 9 juin 2017. Tous les renseignements sont disponibles sur le site web du colloque (https://immuninv2017.sciencesconf.org), et les inscriptions y sont ouvertes jusqu’au 15 avril 2017.
Tous les 18 mois, la communauté des chercheurs s’intéressant à l’immunologie des Invertébrés se réunit dans le cadre de ce congrès, afin d’aborder un ensemble de thématiques qui touche aux (...)

14th Symposium on Bacterial Genetics and Ecology (BAGECO)

The aims of BAGECO 14 are to highlight and showcase the ways in which microbial ecology and genetics interact with, and benefit from neighbouring disciplines ; to increase awareness of the perception of microbial ecology by our neighbours in these disciplines ; and to determine what these related disciplines want from microbial ecologists. BAGECO 14 will therefore focus on the boundaries between microbial ecology and genetics and the disciplines with which they interact most closely and (...)