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Accueil > Productions scientifiques > Année 2013

Année 2013

Articles à comité de lecture



  • Piola F, et al. 2013. Invasive <i>Fallopia</i> × <i>Bohemica</i> Interspecific Hybrids Display Different Patterns in Secondary Metabolites. Ecoscience. 20:230-239. doi: 10.2980/20-3-3597.


  • de Freitas V, Comte G, Santos-Buelga C. 2013. Guest Editorial – XXVIth International Conference on Polyphenols (ICP 2012). Phytochemical Analysis. 24:423-423. doi: 10.1002/pca.2469.

  • Mermillod-Blondin F, et al. 2013. Benzo(a)pyrene inhibits the role of the bioturbator Tubifex tubifex in river sediment biogeochemistry. The Science of the Total Environment. 450-451:230-241. doi: 10.1016/j.scitotenv.2013.02.013.


  • Hugoni M, et al. 2013. Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems. Research in Microbiology. 164:360-370. doi: 10.1016/j.resmic.2013.01.004.


  • Hugoni M, et al. 2013. Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters. Proceedings of the National Academy of Sciences. 110:6004-6009. doi: 10.1073/pnas.1216863110.

  • Barret A-S, et al. 2013. Shopper cards data and storage practices for the investigation of an outbreak of Shiga-toxin producing Escherichia coli O157 infections. Médecine Et Maladies Infectieuses. 43:368-373. doi: 10.1016/j.medmal.2013.05.004.


  • Le Quellec S, et al. 2013. Septic Arthritis Caused by Noncapsulated Haemophilus influenzae. Journal of Clinical Microbiology. 51:1970-1972. doi: 10.1128/JCM.03377-12.


  • Miszczycha SD, et al. 2013. Behavior of Different Shiga Toxin-Producing Escherichia coli Serotypes in Various Experimentally Contaminated Raw-Milk Cheeses. Applied and Environmental Microbiology. 79:150-158. doi: 10.1128/AEM.02192-12.


  • Dunière L, Sindou J, Chaucheyras-Durand F, Chevallier I, Thévenot-Sergentet D. 2013. Silage processing and strategies to prevent persistence of undesirable microorganisms. Animal Feed Science and Technology. 182:1-15. doi: 10.1016/j.anifeedsci.2013.04.006.


  • Farrokh C, et al. 2013. Review of Shiga-toxin-producing Escherichia coli (STEC) and their significance in dairy production. International Journal of Food Microbiology. 162:190-212. doi: 10.1016/j.ijfoodmicro.2012.08.008.


  • Cantarel A, Bloor JMG, Soussana J-F. 2013. Four years of simulated climate change reduces above-ground productivity and alters functional diversity in a grassland ecosystem. Journal of Vegetation Science. 24:113-126. doi: 10.1111/j.1654-1103.2012.01452.x.


  • Saccone P, et al. 2013. The effects of snowpack properties and plant strategies on litter decomposition during winter in subalpine meadows. Plant and Soil. 363:215-229. doi: 10.1007/s11104-012-1307-3.


  • Rees RM, et al. 2013. Nitrous oxide emissions from European agriculture – an analysis of variability and drivers of emissions from field experiments. Biogeosciences. 10:2671-2682. doi: 10.5194/bg-10-2671-2013.


  • Crespo BG, Pommier T, Fernández-Gómez B, Pedrós-Alió C. 2013. Taxonomic composition of the particle-attached and free-living bacterial assemblages in the Northwest Mediterranean Sea analyzed by pyrosequencing of the 16S rRNA. MicrobiologyOpen. 2:541-552. doi: 10.1002/mbo3.92.


  • Allan E, et al. 2013. A comparison of the strength of biodiversity effects across multiple functions. Oecologia. 173:223-237. doi: 10.1007/s00442-012-2589-0.


  • Sébastian C, et al. 2013. Accumulated sediments in a detention basin: chemical and microbial hazard assessment linked to hydrological processes. Environmental Science and Pollution Research. 1-12. doi: 10.1007/s11356-013-2397-z.


  • Bourtzis K, et al. 2013. Harnessing mosquito–Wolbachia symbiosis for vector and disease control. Acta Tropica. doi: 10.1016/j.actatropica.2013.11.004.

  • Nesme X, et al. 2013. Investigating the species and strain diversity of agrobacteria by MLSA: toward a phylogenetically relevant redefinition of the genus Agrobacterium. Frontiers in Plant-Microbe Interaction. http://www.frontiersin.org/Journal/abstract/58126.


  • Drogue B, Sanguin H, Borland S, Prigent-Combaret C, Wisniewski-Dyé F. 2013. Genome wide profiling of <i>Azospirillum lipoferum</i> 4B gene expression during interaction with rice roots. FEMS Microbiology Ecology. n/a–n/a. doi: 10.1111/1574-6941.12244.


  • Youenou B, Brothier E, Nazaret S. 2013. Diversity among strains of Pseudomonas aeruginosa from manure and soil, evaluated by multiple locus variable number tandem repeat analysis and antibiotic resistance profiles. Research in Microbiology. doi: 10.1016/j.resmic.2013.10.004.

  • Vausselin T, et al. 2013. The antimalarial ferroquine is an inhibitor of hepatitis C virus. Hepatology (Baltimore, Md.). 58:86-97. doi: 10.1002/hep.26273.


  • Minard G, Mavingui P, Valiente-Moro C. 2013. Diversity and function of bacterial microbiota in the mosquito holobiont. Parasites & Vectors. 6:146. doi: 10.1186/1756-3305-6-146.


  • Normand P. 2013. A brief history of Frankia and actinorhizal plants meetings. Journal of Biosciences. 1-8. doi: 10.1007/s12038-013-9373-0.


  • Maquart M, et al. 2013. Development of real-time RT-PCR for the detection of low concentrations of Rift Valley fever virus. Journal of Virological Methods. doi: 10.1016/j.jviromet.2013.10.001.


  • Mascher F, Hase C, Bouffaud M-L, Défago G, Moënne-Loccoz Y. 2013. Cell culturability of Pseudomonas protegens CHA0 depends on soil pH. FEMS Microbiology Ecology. n/a–n/a. doi: 10.1111/1574-6941.12234.


  • Vacheron J, et al. 2013. Plant growth-promoting rhizobacteria and root system functioning. Frontiers in Plant Science - Functional plant Ecology. 4:356. doi: 10.3389/fpls.2013.00356.

  • Richau KH, Kudahettige RL, Pujic P, Kudahettige NP, Sellstedt A. 2013. Structural and gene expression analyses of uptake hydrogenases and other proteins involved in nitrogenase protection in Frankia. J. Biosci. 38:703–712. http://www.ias.ac.in/jbiosci/nov2013/703.pdf.


  • Haichar FZ, Fochesato S, Achouak W. 2013. Host Plant Specific Control of 2,4-Diacetylphloroglucinol Production in the Rhizosphere. Agronomy. 3:621-631. doi: 10.3390/agronomy3040621.

  • Nouioui I, et al. 2013. First report on the occurrence of the uncultivated cluster 2 Frankia microsymbionts in soil outside the native actinorhizal host range area. J. Biosci. 38:695–698. http://www.ias.ac.in/jbiosci/nov2013/695.pdf.

  • Carro-Garcia L, Pujic P, Etrujillo M, Normand P. 2013. Micromonospora is a normal occupant of actinorhizal nodules. J. Biosci. 38:685–693. http://www.ias.ac.in/jbiosci/nov2013/685.pdf.


  • Geiger M, et al. 2013. Cytotoxicity and mycotoxin production of shellfish-derived <i>Penicillium<i/> spp., a risk for shellfish consumers. Letters in Applied Microbiology. 57:385-392. doi: 10.1111/lam.12143.


  • Marmeisse R, Nehls U, Öpik M, Selosse MA, Pringle A. 2013. Bridging mycorrhizal genomics, metagenomics and forest ecology. New Phytologist. 198:343–346. doi: 10.1111/nph.12205.


  • Klaubauf S, et al. 2013. The pentose catabolic pathway of the rice-blast fungus Magnaporthe oryzae involves a novel pentose reductase restricted to few fungal species. FEBS Letters. 587:1346-1352. doi: 10.1016/j.febslet.2013.03.003.


  • Champagne A, Legendre L, Lebot V. 2013. Biofortification of taro (Colocasia esculenta) through breeding for increased contents in carotenoids and anthocyanins. Euphytica. 194:125-136. doi: 10.1007/s10681-013-0980-5.

  • Thakur S, Normand P, Daubin V, Tisa LS, Sen A. 2013. Contrasted evolutionary constraints on secreted and non-secreted proteomes of selected Actinobacteria. BMC Genomics. 14:474. http://www.biomedcentral.com/1471-2164/14/474.


  • Sabart M, et al. 2013. The importance of small colonies in sustaining Microcystis population exposed to mixing conditions: an exploration through colony size, genotypic composition and toxic potential. Environmental Microbiology Reports. n/a–n/a. doi: 10.1111/1758-2229.12077.


  • Petit SM-C, et al. 2013. Lagooning of wastewaters favors dissemination of clinically relevant Pseudomonas aeruginosa. Research in Microbiology. doi: 10.1016/j.resmic.2013.06.007.


  • Luis P, Gauthier A, Trouvelot S, Poinssot B, Frettinger P. 2013. The identification of Plasmopara viticola genes potentially involved in pathogenesis on grapevine suggests new similarities between oomycetes and true fungi. Phytopathology. 130501115210007. doi: 10.1094/PHYTO-06-12-0121-R.


  • Cheynier V, Comte G, Davies KM, Lattanzio V, Martens S. 2013. Plant phenolics: Recent advances on their biosynthesis, genetics, and ecophysiology. Plant Physiology and Biochemistry. 72:1-20. doi: 10.1016/j.plaphy.2013.05.009.


  • Lavorel S, et al. 2013. A novel framework for linking functional diversity of plants with other trophic levels for the quantification of ecosystem services. Journal of Vegetation Science. n/a–n/a. doi: 10.1111/jvs.12083.


  • Michalet S, et al. 2013. Phytochemical analysis of mature tree root exudates <i>in situ</i> and their role in shaping soil microbial communities in relation to tree N-acquisition strategy. Plant Physiology and Biochemistry. 72:169-177. doi: 10.1016/j.plaphy.2013.05.003.


  • Zoropogui A, et al. 2013. The Nocardia cyriacigeorgica GUH-2 genome shows ongoing adaptation of an environmental Actinobacteria to a pathogen's lifestyle. BMC Genomics. 14:286. doi: 10.1186/1471-2164-14-286.


  • Le Roux X, et al. 2013. Soil Environmental Conditions and Microbial Build-Up Mediate the Effect of Plant Diversity on Soil Nitrifying and Denitrifying Enzyme Activities in Temperate Grasslands. PLoS ONE. 8. doi: 10.1371/journal.pone.0061069.


  • Lehembre F, et al. 2013. Soil metatranscriptomics for mining eukaryotic heavy metal resistance genes. Environmental Microbiology. n/a–n/a. doi: 10.1111/1462-2920.12143.


  • Andres J, et al. 2013. Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium Rhizobium sp. NT-26. Genome Biology and Evolution. doi: 10.1093/gbe/evt061.


  • Rakotomalala G, et al. 2013. Extract from Mimosa pigra attenuates chronic experimental pulmonary hypertension. Journal of Ethnopharmacology. 148:106-116. doi: 10.1016/j.jep.2013.03.075.


  • Shams M, Vial L, Chapulliot D, Nesme X, Lavire C. 2013. Rapid and accurate species and genomic species identification and exhaustive population diversity assessment of <i>Agrobacterium</i> spp. using <i>recA</i>-based PCR. Systematic and Applied Microbiology. 36:351-358. doi: 10.1016/j.syapm.2013.03.002.


  • Almario J, et al. 2013. Assessment of the relationship between geologic origin of soil, rhizobacterial community composition and soil receptivity to tobacco black root rot in Savoie region (France). Plant and Soil. 1-12. doi: 10.1007/s11104-013-1677-1.


  • Valiente-Moro C, Tran FH, Raharimalala FN, Ravelonandro P, Mavingui P. 2013. Diversity of culturable bacteria including Pantoea in wild mosquito Aedes albopictus. BMC Microbiology. 13:70. doi: 10.1186/1471-2180-13-70.


  • Colinon C, et al. 2013. Detection and enumeration of Pseudomonas aeruginosa in soil and manure assessed by an ecfX qPCR assay. Journal of Applied Microbiology. doi: 10.1111/jam.12189.

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Livres

Chapitres de livre



  • Bressan M, Achouak W, Berge O. 2013. Exogenous Glucosinolate Produced by Transgenic Arabidopsis thaliana has an Impact on Microbes in the Rhizosphere and Plant Roots. In: Molecular Microbial Ecology of the Rhizosphere. Bruijn, FJ de. John Wiley & Sons, Inc. p. 1173-1179. http://onlinelibrary.wiley.com/doi/10.1002/9781118297674.ch112/summary.

  • Achouak W, Haichar FZ. 2013. Shaping of microbial community structure and function in the rhizosphere by four diverse plant species. In: Molecular Microbial Ecology of the Rhizosphere. Frans J. de Bruijn, published by Wiley/Blackwell, ISBN p. .


  • Bruto M, et al. 2013. Horizontal Acquisition of Prokaryotic Genes for Eukaryote Functioning and Niche Adaptation. In: Evolutionary Biology: Exobiology and Evolutionary Mechanisms. Pontarotti, P. Springer Berlin Heidelberg p. 165-179. http://link.springer.com/chapter/10.1007/978-3-642-38212-3_11.


  • Fraissinet-Tachet L, Marmeisse R, Zinger L, Luis P. 2013. Metatranscriptomics of Soil Eukaryotic Communities. In: The Ecological Genomics of Fungi. Francisrtin,. John Wiley & Sons, Inc p. 305–323. http://onlinelibrary.wiley.com/doi/10.1002/9781118735893.ch14/summary.

  • Wisniewski-Dyé F, Drogue B, Borland S, Prigent-Combaret C. 2013. <i>Azospirillum</i>-Plant Interaction: from Root Colonization to Plant Growth Promotion. In: Beneficial Plant-Microbial Interactions: Ecology and Applications. CRC Press p. .

  • Drogue B, Combes-Meynet E, Moënne-Loccoz Y, Wisniewski-Dyé F, Prigent-Combaret C. 2013. Control of the Cooperation Between Plant Growth-Promoting Rhizobacteria and Crops by Rhizosphere Signals. In: Molecular Microbial Ecology of the Rhizosphere, Two Volume Set. John Wiley & Sons p. 281.


  • Dusseau J-Y, Duroselle P, Freney J. 2013. Gaseous Sterilization. In: Russell, Hugo & Ayliffe's. Wiley-Blackwell p. 306–332. http://onlinelibrary.wiley.com/doi/10.1002/9781118425831.ch15c/summary.