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En - Multi-résistance Environnementale et Efflux Bactérien

Team Leader : NAZARET Sylvie
Team Coleader : DIJOUX-FRANCA Marie-Geneviève


Permanent members

BROTHIER Elisabeth Engineer (IE), CNRS
DIJOUX-FRANCA Marie-Geneviève Professor (PR), UCB
FAVRE-BONTE Sabine Lecturer (MCF), UCB
MEIFFREN Guillaume Engineer (IE), UCB
MICHALET Serge Lecturer (MCF), ISPB
NAZARET Sylvie Research Scientist (CR), CNRS
BODILIS Josselin Lecturer (MCF), UCB(visite)

Non permanent members

Pham Nam Hoang PhD Student USTH
Samira Ait Moussa PhD Student 12-15
Moussa Aoudalkarim PhD Student 12-15
Salomon Bouba PhD Student 13-16
Elodie Denet PhD Student 14-17
Cassandra Backes Master Student 14-15
Pauline Feuillet Master Student 14-15

in progress...



Bibliography :


  • Barberis, L., Chevalier, W., Toussaint, M.-L., Binet, P., Piola, F., Michalet, S., 2020. Responses of the species complex Fallopia × bohemica to single-metal contaminations to Cd, Cr or Zn: growth traits, metal accumulation and secondary metabolism. Environmental Monitoring and Assessment 192, 673.

  • Denet, E., Triadou, S., Michalet, S., Nazaret, S., Favre‐Bonté, S., 2020. Growth of Stenotrophomonas maltophilia and expression of Sme efflux pumps encoding genes in the presence of supernatants from amoebal and bacterial co-cultures: towards the role of amoebal secondary metabolites. Environmental Microbiology Reports 12, 702-711.

  • Duangsodsri, T., Villain, L., Vestalys, I.R., Michalet, S., Abdallah, C., Breitler, J.-C., Bordeaux, M., Villegas, A.M., Raherimandimby, M., Legendre, L., Etienne, H., Bertrand, B., Campa, C., 2020. 5-CQA and Mangiferin, Two Leaf Biomarkers of Adaptation to Full Sun or Shade Conditions in Coffea arabica L. Metabolites 10, 383.

  • Goulas, A., Belhadi, D., Descamps, A., Andremont, A., Benoit, P., Courtois, S., Dagot, C., Grall, N., Makowski, D., Nazaret, S., Nélieu, S., Patureau, D., Petit, F., Roose-Amsaleg, C., Vittecoq, M., Livoreil, B., Laouénan, C., 2020. How effective are strategies to control the dissemination of antibiotic resistance in the environment? A systematic review. Environmental Evidence 9, 4.

  • Zaabat, N., Hay, A.-E., Michalet, S., Skandrani, I., Chekir-Ghedirac, L., Dijoux-Francaa, M.-G., Akkal, S., 2020. Chemical Composition, Antioxidant, Genotoxique and Antigenotoxic Potentials of Phlomis Bovei De Noé Aerial Parts. Iranian Journal of Pharmaceutical Research 19.


  • Lebot, V., Michalet, S., Legendre, L., 2019. Kavalactones and Flavokavins Profiles Contribute to Quality Assessment of Kava (Piper methysticum G. Forst.), the Traditional Beverage of the Pacific. Beverages 5, 34.

  • Lloyd, N.A., Nazaret, S., Barkay, T., 2019. Genome-facilitated discovery of RND efflux pump-mediated resistance to cephalosporins in Vibrio spp. isolated from the mummichog fish gut. Journal of Global Antimicrobial Resistance.

  • Maaloul, A., Michalet, S., Saadaoui, E., Ghzel, N., Bekir, J., Romdhane, C.B., Mars, M., Dijoux-Franca, M.-G., Romdhane, M., 2019. Effect of treated wastewater on growth and secondary metabolites production of two Eucalyptus species. Agricultural Water Management 211, 1-9.

  • Maaloul, A., Sancho, M.V.E.R.D.E.G.U.E.R., Oddo, M., Saadaoui, E., Jebri, M., Michalet, S., Dijoux Franca, M.G., Mars, M., Romdhane, M., 2019. Effect of Short and Long Term Irrigation with Treated Wastewater on Chemical Composition and Herbicidal Activity of Eucalyptus camaldulensis Dehn. Essential Oils. Notulae Botanicae Horti Agrobotanici Cluj-Napoca 47, 1374-1381.

  • Michalet, S., Minard, G., Chevalier, W., Meiffren, G., Saucereau, Y., Tran Van, V., Comte, G., Tran, F.H., Valiente Moro, C., 2019. Identification of human skin bacteria attractive to the Asian Tiger mosquito. Environmental Microbiology 21, 4662-4674.


  • Bodilis, J., Denet, E., Brothier, E., Graindorge, A., Favre-Bonté, S., Nazaret, S., 2018. Comparative Genomics of Environmental and Clinical Burkholderia cenocepacia Strains Closely Related to the Highly Transmissible Epidemic ET12 Lineage. Frontiers in Microbiology 9.

  • Denet, E., Vasselon, V., Burdin, B., Nazaret, S., Favre-Bonté, S., 2018. Survival and growth of Stenotrophomonas maltophilia in free-living amoebae (FLA) and bacterial virulence properties. PLOS ONE 13, e0192308.

  • Lloyd, N.A., Nazaret, S., Barkay, T., 2018. Whole genome sequences to assess the link between antibiotic and metal resistance in three coastal marine bacteria isolated from the mummichog gastrointestinal tract. Marine Pollution Bulletin 135, 514-520.

  • Pham, H.N., Pham, P.A., Nguyen, T.T.H., Meiffren, G., Brothier, E., Lamy, I., Michalet, S., Dijoux-Franca, M.-G., Nazaret, S., 2018. Influence of metal contamination in soil on metabolic profiles of Miscanthus x giganteus belowground parts and associated bacterial communities. Applied Soil Ecology 125, 240-249.

  • Radix, S., Jordheim, A.D., Rocheblave, L., N'Digo, S., Prignon, A.-L., Commun, C., Michalet, S., Dijoux-Franca, M.-G., Mularoni, A., Walchshofer, N., 2018. N,N′ -disubstituted cinnamamide derivatives potentiate ciprofloxacin activity against overexpressing NorA efflux pump Staphylococcus aureus 1199B strains. European Journal of Medicinal Chemistry.

  • Rouifed, S., Puijalon, S., Bardon, C., Meiffren, G., Buonomo, A., Sebei, N., Poussineau, S., Vallier, F., Shimoda, M., Piola, F., 2018. Comparison of defence and performance traits between one widespread clone and native populations in a major invasive plant species. Diversity and Distributions.


  • Bardon, C., Poly, F., Haichar, F.Z., Le Roux, X., Simon, L., Meiffren, G., Comte, G., Rouifed, S., Piola, F., 2017. Biological denitrification inhibition (BDI) with procyanidins induces modification of root traits, growth and N status in Fallopia x bohemica. Soil Biology and Biochemistry 107, 41-49.

  • Crampon, M., Cébron, A., Portet-Koltalo, F., Uroz, S., Le Derf, F., Bodilis, J., 2017. Low effect of phenanthrene bioaccessibility on its biodegradation in diffusely contaminated soil. Environmental Pollution 225, 663-673.

  • Denet, E., Coupat-Goutaland, B., Nazaret, S., Pélandakis, M., Favre-Bonté, S., 2017. Diversity of free-living amoebae in soils and their associated human opportunistic bacteria. Parasitology Research.

  • El Moujahid, L., Le Roux, X., Michalet, S., Bellvert, F., Weigelt, A., Poly, F., 2017. Effect of plant diversity on the diversity of soil organic compounds. PLOS ONE 12, e0170494.

  • Guyonnet, J.P., Vautrin, F., Meiffren, G., Labois, C., Cantarel, A.A.M., Michalet, S., Comte, G., Haichar, F.Z., 2017. The effects of plant nutritional strategy on soil microbial denitrification activity through rhizosphere primary metabolites. FEMS Microbiology Ecology 93.

  • Hay, A.E., Boubakri, H., Buonomo, A., Rey, M., Meiffren, G., Cotin-Galvan, L., Comte, G., Herrera-Belaroussi, A., 2017. Control of Endophytic Frankia Sporulation by Alnus Nodule Metabolites. Molecular Plant-Microbe Interactions 30, 205-214.

  • Lebot, V., Lawac, F., Michalet, S., Legendre, L., 2017. Characterization of taro [Colocasia esculenta (L.) Schott] germplasm for improved flavonoid composition and content. Plant Genetic Resources 15, 260-268.

  • Lhuissier, T., Mercier, P.-E., Michalet, S., Lebot, V., Legendre, L., 2017. Colorimetric assessment of kava (Piper methysticum Forst.) quality. Journal of Food Composition and Analysis 59, 27-34.

  • Michalet, S., Rouifed, S., Pellassa-Simon, T., Fusade-Boyer, M., Meiffren, G., Nazaret, S., Piola, F., 2017. Tolerance of Japanese knotweed s.l. to soil artificial polymetallic pollution: early metabolic responses and performance during vegetative multiplication. Environmental Science and Pollution Research 1-11.

  • Pham, H.N., Michalet, S., Bodillis, J., Nguyen, T.D., Nguyen, T.K.O., Le, T.P.Q., Haddad, M., Nazaret, S., Dijoux-Franca, M.-G., 2017. Impact of metal stress on the production of secondary metabolites in Pteris vittata L. and associated rhizosphere bacterial communities. Environmental Science and Pollution Research 1-16.