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Accueil > Productions scientifiques > Année 2020

Année 2020

Articles à comité de lecture



  • Voisin, J., Cournoyer, B., Marjolet, L., Vienney, A., Mermillod-Blondin, F., 2020. Ecological assessment of groundwater ecosystems disturbed by recharge systems using organic matter quality, biofilm characteristics, and bacterial diversity. Environmental Science and Pollution Research 27, 3295-3308. https://doi.org/10.1007/s11356-019-06971-5


  • Navratil, O., Boukerb, M.A., Perret, F., Breil, P., Caurel, C., Schmitt, L., Lejot, J., Petit, S., Marjolet, L., Cournoyer, B., 2020. Responses of streambed bacterial groups to cycles of low‐flow and erosive floods in a small peri‐urban stream. Ecohydrology 13. https://doi.org/10.1002/eco.2206


  • Adamo, M., Voyron, S., Chialva, M., Marmeisse, R., Girlanda, M., 2020. Metabarcoding on both environmental DNA and RNA highlights differences between fungal communities sampled in different habitats. PLOS ONE 15, e0244682. https://doi.org/10.1371/journal.pone.0244682


  • Lafont, E., Conan, P.-L., Rodriguez-Nava, V., Lebeaux, D., 2020. Invasive Nocardiosis: Disease Presentation, Diagnosis and Treatment – Old Questions, New Answers? Infection and Drug Resistance Volume 13, 4601-4613. https://doi.org/10.2147/IDR.S249761


  • Betzabeth Espina-Benitez, M., Denet, E., Bolzinger, M.-A., Rodriguez-Nava, V., Pollet, T., Pitault, I., Blaha, D., Briancon, S., 2020. Décontamination sèche de simulants chimiques et biologiques. Medecine de Catastrophe Urgences Collectives. https://doi.org/10.1016/j.pxur.2020.06.004


  • Cantarel, A.A.M., Allard, V., Andrieu, B., Barot, S., Enjalbert, J., Gervaix, J., Goldringer, I., Pommier, T., Saint-Jean, S., Le Roux, X., 2020. Plant functional trait variability and trait syndromes among wheat varieties: the footprint of artificial selection. Journal of Experimental Botany. https://doi.org/10.1093/jxb/eraa491


  • Valette, M., Rey, M., Doré, J., Gerin, F., Wisniewski-Dyé, F., 2020. Identification of a small set of genes commonly regulated in rice roots in response to beneficial rhizobacteria. Physiology and Molecular Biology of Plants 26, 2537-2551. https://doi.org/10.1007/s12298-020-00911-1


  • Lebot, V., Kaoh, J., Legendre, L., 2020. High-Throughput Analysis of Flavokawains in Kava (Piper methysticum Forst. f.) Roots, Chips and Powders and Correlations with Their Acetonic Extracts Absorbance. Food Analytical Methods 13, 1583-1593. https://doi.org/10.1007/s12161-020-01781-9


  • Camus, L., Briaud, P., Bastien, S., Elsen, S., Doléans-Jordheim, A., Vandenesch, F., Moreau, K., 2020. Trophic cooperation promotes bacterial survival of Staphylococcus aureus and Pseudomonas aeruginosa. The ISME Journal 14, 3093-3105. https://doi.org/10.1038/s41396-020-00741-9


  • Courtois, P., Rorat, A., Lemiere, S., Guyoneaud, R., Attard, E., Longepierre, M., Rigal, F., Levard, C., Chaurand, P., Grosser, A., Grobelak, A., Kacprzak, M., Lors, C., Richaume, A., Vandenbulcke, F., 2020. Medium-term effects of Ag supplied directly or via sewage sludge to an agricultural soil on Eisenia fetida earthworm and soil microbial communities. Chemosphere 128761. https://doi.org/10.1016/j.chemosphere.2020.128761


  • Roussel, C., De Paepe, K., Galia, W., De Bodt, J., Chalancon, S., Leriche, F., Ballet, N., Denis, S., Alric, M., Van de Wiele, T., Blanquet-Diot, S., 2020. Spatial and temporal modulation of enterotoxigenic E. coli H10407 pathogenesis and interplay with microbiota in human gut models. BMC Biology 18, 141. https://doi.org/10.1186/s12915-020-00860-x


  • Morinière, L., Burlet, A., Rosenthal, E.R., Nesme, X., Portier, P., Bull, C.T., Lavire, C., Fischer-Le Saux, M., Bertolla, F., 2020. Clarifying the taxonomy of the causal agent of bacterial leaf spot of lettuce through a polyphasic approach reveals that <i>Xanthomonas cynarae</i> Trébaol et al. 2000 emend. Timilsina et al. 2019 is a later heterotypic synonym of <i>Xanthomonas hortorum</i> Vauterin et al. 1995. Systematic and Applied Microbiology 43, 126087. https://doi.org/10.1016/j.syapm.2020.126087


  • Colin, Y., Bouchali, R., Marjolet, L., Marti, R., Vautrin, F., Voisin, J., Bourgeois, E., Rodriguez-Nava, V., Blaha, D., Winiarski, T., Mermillod-Blondin, F., Cournoyer, B., 2020. Coalescence of bacterial groups originating from urban runoffs and artificial infiltration systems among aquifer microbiomes. Hydrology and Earth System Sciences 24, 4257-4273. https://doi.org/10.5194/hess-24-4257-2020


  • Zaabat, N., Hay, A.-E., Michalet, S., Skandrani, I., Chekir-Ghedirac, L., Dijoux-Francaa, M.-G., Akkal, S., 2020. Chemical Composition, Antioxidant, Genotoxique and Antigenotoxic Potentials of Phlomis Bovei De Noé Aerial Parts. Iranian Journal of Pharmaceutical Research 19. https://doi.org/10.22037/ijpr.2019.15197.12938


  • Rieusset, L., Rey, M., Muller, D., Vacheron, J., Gerin, F., Dubost, A., Comte, G., Prigent‐Combaret, C., 2020. Secondary metabolites from plant‐associated <i>Pseudomonas</i> are overproduced in biofilm. Microbial Biotechnology 13, 1562-1580. https://doi.org/10.1111/1751-7915.13598

  • Duplouy, A., Minard, G., Saastamoinen, M., 2020. The gut bacterial community affects immunity but not metabolism in a specialist herbivorous butterfly. Ecology and Evolution 10, 8755-8769. https://doi.org/10.1002/ece3.6573


  • Nicolas De Lamballerie, C., Pizzorno, A., Dubois, J., Padey, B., Julien, T., Traversier, A., Carbonneau, J., Orcel, E., Lina, B., Hamelin, M.-E., Roche, M., Textoris, J., Boivin, G., Legras-Lachuer, C., Terrier, O., Rosa-Calatrava, M., 2020. Human Respiratory Syncytial Virus-Induced Immune Signature of Infection Revealed by Transcriptome Analysis of Clinical Pediatric Nasopharyngeal Swab Samples. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jiaa468


  • Denet, E., Triadou, S., Michalet, S., Nazaret, S., Favre‐Bonté, S., 2020. Growth of Stenotrophomonas maltophilia and expression of Sme efflux pumps encoding genes in the presence of supernatants from amoebal and bacterial co-cultures: towards the role of amoebal secondary metabolites. Environmental Microbiology Reports 12, 702-711. https://doi.org/10.1111/1758-2229.12884


  • Pozzi, A.C.M., Herrera-Belaroussi, A., Schwob, G., Bautista-Guerrero, H.H., Bethencourt, L., Fournier, P., Dubost, A., Abrouk, D., Normand, P., Fernandez, M.P., 2020. Proposal of 'Candidatus Frankia alpina', the uncultured symbiont of Alnus alnobetula and A. incana that forms spore-containing nitrogen-fixing root nodules. International Journal of Systematic and Evolutionary Microbiology. https://doi.org/10.1099/ijsem.0.004433


  • Lafont, E., Marciano, B.E., Mahlaoui, N., Neven, B., Bustamante, J., Rodriguez-Nava, V., Rawat, A., Unzaga, M.J., Fischer, A., Blanche, S., Lortholary, O., Holland, S.M., Lebeaux, D., 2020. Nocardiosis Associated with Primary Immunodeficiencies (Nocar-DIP): an International Retrospective Study and Literature Review. Journal of Clinical Immunology. https://doi.org/10.1007/s10875-020-00866-8


  • Duangsodsri, T., Villain, L., Vestalys, I.R., Michalet, S., Abdallah, C., Breitler, J.-C., Bordeaux, M., Villegas, A.M., Raherimandimby, M., Legendre, L., Etienne, H., Bertrand, B., Campa, C., 2020. 5-CQA and Mangiferin, Two Leaf Biomarkers of Adaptation to Full Sun or Shade Conditions in Coffea arabica L. Metabolites 10, 383. https://doi.org/10.3390/metabo10100383


  • Herrera-Belaroussi, A., Normand, P., Pawlowski, K., Fernandez, M.P., Wibberg, D., Kalinowski, J., Brachmann, A., Berckx, F., Lee, N., Blom, J., Pozzi, A.C., Fournier, P., Bethencourt, L., Dubost, A., Abrouk, D., Sellstedt, A., 2020. Candidatus Frankia nodulisporulans sp. nov., an Alnus glutinosa-infective Frankia species unable to grow in pure culture and able to sporulate in-planta. Systematic and Applied Microbiology 43, 126134. https://doi.org/10.1016/j.syapm.2020.126134


  • Barberis, L., Chevalier, W., Toussaint, M.-L., Binet, P., Piola, F., Michalet, S., 2020. Responses of the species complex Fallopia × bohemica to single-metal contaminations to Cd, Cr or Zn: growth traits, metal accumulation and secondary metabolism. Environmental Monitoring and Assessment 192, 673. https://doi.org/10.1007/s10661-020-08627-1


  • Lotte, R., Chevalier, A., Dantas, S., Degand, N., Gaudart, A., Rörhlich, P.-S., Boyer, L., Rodriguez-Nava, V., Del Giudice, P., Ruimy, R., 2020. Nocardia takedensis: a newly recognized pathogen responsible for skin and soft tissue infections. Annals of Clinical Microbiology and Antimicrobials 19, 38. https://doi.org/10.1186/s12941-020-00379-7


  • Galland, W., Piola, F., Mathieu, C., Bouladra, L., Simon, L., Haichar, F.Z., 2020. Does Biological Denitrification Inhibition (BDI) in the Field Induce an Increase in Plant Growth and Nutrition in Apium graveolens L. Grown for a Long Period? Microorganisms 8, 1204. https://doi.org/10.3390/microorganisms8081204


  • Mani, K., Taib, N., Hugoni, M., Bronner, G., Bragança, J.M., Debroas, D., 2020. Transient Dynamics of Archaea and Bacteria in Sediments and Brine Across a Salinity Gradient in a Solar Saltern of Goa, India. Frontiers in Microbiology 11. https://doi.org/10.3389/fmicb.2020.01891


  • Guégan, M., Martin, E., Valiente Moro, C., 2020. Comparative Analysis of the Bacterial and Fungal Communities in the Gut and the Crop of Aedes albopictus Mosquitoes: A Preliminary Study. Pathogens 9, 628. https://doi.org/10.3390/pathogens9080628


  • Nguyen, T.H., Doré, J., Ait Barka, E., Lavire, C., Clement, C., Vial, L., Sanchez, L., 2020. Development of a DNA based real time PCR assay to quantify Allorhizobium vitis over time in grapevine (Vitis vinifera L.) plantlets. Plant Disease. https://doi.org/10.1094/PDIS-04-20-0732-RE


  • Fouret, J., Brunet, F.G., Binet, M., Aurine, N., Enchéry, F., Croze, S., Guinier, M., Goumaidi, A., Preininger, D., Volff, J.-N., Bailly-Bechet, M., Lachuer, J., Horvat, B., Legras-Lachuer, C., 2020. Sequencing the Genome of Indian Flying Fox, Natural Reservoir of Nipah Virus, Using Hybrid Assembly and Conservative Secondary Scaffolding. Frontiers in Microbiology 11. https://doi.org/10.3389/fmicb.2020.01807


  • Jurburg, S.D., Assemien, F.L., Beaumelle, L., Salles, J.F., Van Elsas, J.D., Le Roux, X., 2020. A history of extreme disturbance affects the relationship between the abundances of nitrifiers in soil. Biology and Fertility of Soils 56, 1177-1187. https://doi.org/10.1007/s00374-020-01491-8


  • Malassigné, S., Valiente Moro, C., Luis, P., 2020. Mosquito Mycobiota: An Overview of Non-Entomopathogenic Fungal Interactions. Pathogens 9, 564. https://doi.org/10.3390/pathogens9070564


  • Denet, E., Espina-Benitez, M.B., Pitault, I., Pollet, T., Blaha, D., Bolzinger, M.-A., Rodriguez-Nava, V., Briançon, S., 2020. Metal oxide nanoparticles for the decontamination of toxic chemical and biological compounds. International Journal of Pharmaceutics 583, 119373. https://doi.org/10.1016/j.ijpharm.2020.119373


  • Cantarel, A.A.M., Rouifed, S., Simon, L., Bourg, J., Gervaix, J., Blazère, L., Poussineau, S., Creuzé des Châtelliers, C., Piola, F., 2020. In Nitrate-Rich Soil, Fallopia x bohemica Modifies Functioning of N Cycle Compared to Native Monocultures. Diversity 12, 156. https://doi.org/10.3390/d12040156


  • Massip, C., Coullaud-Gamel, M., Gaudru, C., Amoureux, L., Doleans-Jordheim, A., Hery-Arnaud, G., Marchandin, H., Oswald, E., Segonds, C., Guet-Revillet, H., 2020. In vitro activity of 20 antibiotics against Cupriavidus clinical strains. Journal of Antimicrobial Chemotherapy 75, 1654-1658. https://doi.org/10.1093/jac/dkaa066


  • Czarnes, S., Mercier, P.-E., Lemoine, D.G., Hamzaoui, J., Legendre, L., 2020. Impact of soil water content on maize responses to the plant growth-promoting rhizobacterium Azospirillum lipoferum CRT1. Journal of Agronomy and Crop Science n/a. https://doi.org/10.1111/jac.12399


  • Vigouroux, A., Doré, J., Marty, L., Aumont-Nicaise, M., Legrand, P., Dessaux, Y., Vial, L., Moréra, S., 2020. Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches. Biochemical Journal 477, 615-628. https://doi.org/10.1042/BCJ20190886


  • Hay, A.E., Herrera-Belaroussi, A., Rey, M., Fournier, P., Normand, P., Boubakri, H., 2020. Feedback Regulation of N Fixation in <i>Frankia-Alnus</i> Symbiosis Through Amino Acids Profiling in Field and Greenhouse Nodules. Molecular Plant-Microbe Interactions® 33, 499-508. https://doi.org/10.1094/MPMI-10-19-0289-R


  • Akanny, E., Bonhommé, A., Commun, C., Doleans‐Jordheim, A., Farre, C., Bessueille, F., Bourgeois, S., Bordes, C., 2020. Surface‐enhanced Raman spectroscopy using uncoated gold nanoparticles for bacteria discrimination. Journal of Raman Spectroscopy jrs.5827. https://doi.org/10.1002/jrs.5827


  • Goulas, A., Belhadi, D., Descamps, A., Andremont, A., Benoit, P., Courtois, S., Dagot, C., Grall, N., Makowski, D., Nazaret, S., Nélieu, S., Patureau, D., Petit, F., Roose-Amsaleg, C., Vittecoq, M., Livoreil, B., Laouénan, C., 2020. How effective are strategies to control the dissemination of antibiotic resistance in the environment? A systematic review. Environmental Evidence 9, 4. https://doi.org/10.1186/s13750-020-0187-x


  • Gueneau, R., Blanchet, D., Rodriguez-Nava, V., Bergeron, E., Soulier, M., Bestandji, N., Demar, M., Couppie, P., Blaizot, R., 2020. Actinomycetoma caused by Gordonia westfalica: first reported case of human infection. New Microbes and New Infections 100658. https://doi.org/10.1016/j.nmni.2020.100658


  • Gaudino, M., Aurine, N., Dumont, C., Fouret, J., Ferren, M., Mathieu, C., Reynard, O., Volchkov, V.E., Legras-Lachuer, C., Georges-Courbot, M.-C., Horvat, B., 2020. High Pathogenicity of Nipah Virus from <i>Pteropus lylei</i> Fruit Bats, Cambodia. Emerging Infectious Diseases 26, 104-113. https://doi.org/10.3201/eid2601.191284


  • Guégan, M., Tran Van, V., Martin, E., Minard, G., Tran, F.H., Fel, B., Hay, A.-E., Simon, L., Barakat, M., Potier, P., Haichar, F.Z., Valiente Moro, C., 2020. Who is eating fructose within the <i>Aedes albopictus</i> gut microbiota? Environmental Microbiology 1462-2920.14915. https://doi.org/10.1111/1462-2920.14915


  • Laffite, A., Florio, A., Andrianarisoa, K.S., Creuze des Chatelliers, C., Schloter‐Hai, B., Ndaw, S.M., Periot, C., Schloter, M., Zeller, B., Poly, F., Le Roux, X., 2020. Biological inhibition of soil nitrification by forest tree species affects <i>Nitrobacter</i> populations. Environmental Microbiology 1462-2920.14905. https://doi.org/10.1111/1462-2920.14905


  • Sutherland, W.J., Dias, M.P., Dicks, L.V., Doran, H., Entwistle, A.C., Fleishman, E., Gibbons, D.W., Hails, R., Hughes, A.C., Hughes, J., Kelman, R., Le Roux, X., LeAnstey, B., Lickorish, F.A., Maggs, L., Pearce-Higgins, J.W., Peck, L.S., Pettorelli, N., Pretty, J., Spalding, M.D., Tonneijck, F.H., Wentworth, J., Thornton, A., 2020. A Horizon Scan of Emerging Global Biological Conservation Issues for 2020. Trends in Ecology & Evolution 35, 81-90. https://doi.org/10.1016/j.tree.2019.10.010


  • Habbadi, K., Duplay, Q., Chapulliot, D., Kerzaon, I., Benkirane, R., Benbouazza, A., Wisniewski-Dyé, F., Lavire, C., Achbani, E.H., Vial, L., 2020. Characterization and phylogenetic diversity of Allorhizobium vitis isolated from grapevine in Morocco. Journal of Applied Microbiology 128, 828-839. https://doi.org/10.1111/jam.14523


  • de Oliveira, A.B., Cantarel, A.A.M., Seiller, M., Florio, A., Bérard, A., Hinsinger, P., Le Cadre, E., 2020. Short-term plant legacy alters the resistance and resilience of soil microbial communities exposed to heat disturbance in a Mediterranean calcareous soil. Ecological Indicators 108, 105740. https://doi.org/10.1016/j.ecolind.2019.105740


  • Valente, J., Gerin, F., Le Gouis, J., Moënne‐Loccoz, Y., Prigent–Combaret, C., 2020. Ancient wheat varieties have a higher ability to interact with plant growth‐promoting rhizobacteria. Plant, Cell & Environment 43, 246-260. https://doi.org/10.1111/pce.13652


  • Le, H.T., Rochelle‐Newall, E., Ribolzi, O., Janeau, J.L., Huon, S., Latsachack, K., Pommier, T., 2020. Land use strongly influences soil organic carbon and bacterial community export in runoff in tropical uplands‐. Land Degradation & Development 31, 118-132. https://doi.org/10.1002/ldr.3433

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