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Accueil > Productions scientifiques > Année 2017

Année 2017

Articles à comité de lecture



  • Kerangart, S., Cournoyer, B., & Loukiadis, E. (2017). C-source metabolic profilings of foodborne Shiga-toxin producing E. coli match serogroup differentiations and highlight functional adaptations. International Journal Of Food Microbiology. doi:10.1016/j.ijfoodmicro.2017.10.018


  • Chonova, T., Labanowski, J., Cournoyer, B., Chardon, C., Keck, F., Laurent, É., et al. (2017). River biofilm community changes related to pharmaceutical loads emitted by a wastewater treatment plant. Environmental Science And Pollution Research, 1-11. doi:10.1007/s11356-017-0024-0


  • Canouï, E., Blanc, K., Loubinoux, J., Valade, S., Hamard, C., Lefebvre, A., et al. (2017). The value of molecular techniques to diagnose Ureaplasma urealyticum and Nocardia farcinica pleuropneumonia in a patient with diffuse large B-cell lymphoma. International Journal Of Infectious Diseases, 64, 93-95. doi:10.1016/j.ijid.2017.09.015


  • Douëllou, T., Delannoy, S., Ganet, S., Fach, P., Loukiadis, E., Montel, M. - C., & Sergentet-Thevenot, D. (2017). Molecular characterization of O157:H7, O26:H11 and O103:H2 Shiga toxin-producing Escherichia coli isolated from dairy products. International Journal Of Food Microbiology, 253, 59-65. doi:10.1016/j.ijfoodmicro.2017.04.010


  • Lebeaux, D., Freund, R., van Delden, C., Guillot, H., Marbus, S. D., Matignon, M., et al. (2017). Outcome and Treatment of Nocardiosis After Solid Organ Transplantation: New Insights From a European Study. Clinical Infectious Diseases, 64(10), 1396-1405. doi:10.1093/cid/cix124


  • Loukiadis, E., Bièche-Terrier, C., Malayrat, C., Ferré, F., Cartier, P., & Augustin, J. - C. (2017). Distribution of Escherichia coli O157:H7 in ground beef: Assessing the clustering intensity for an industrial-scale grinder and a low and localized initial contamination. International Journal Of Food Microbiology, 250, 75-81. doi:10.1016/j.ijfoodmicro.2017.03.009


  • Pages-Monteiro, L., Marti, R., Commun, C., Alliot, N., Bardel, C., Meugnier, H., et al. (2017). Strong incidence of Pseudomonas aeruginosa on bacterial rrs and ITS genetic structures of cystic fibrosis sputa. Plos One, 12(3), e0173022. doi:10.1371/journal.pone.0173022


  • Marti, R., Ribun, S., Aubin, J. - B., Colinon, C., Petit, S., Marjolet, L., et al. (2017). Human-Driven Microbiological Contamination of Benthic and Hyporheic Sediments of an Intermittent Peri-Urban River Assessed from MST and 16S rRNA Genetic Structure Analyses. Frontiers In Microbiology, 8. doi:10.3389/fmicb.2017.00019


  • Jurburg, S. D., Nunes, I., Stegen, J. C., Le Roux, X., Priemé, A., Sørensen, S. J., & Salles, J. F. (2017). Autogenic succession and deterministic recovery following disturbance in soil bacterial communities. Scientific Reports, 7. doi:10.1038/srep45691


  • Larousse, M., Rancurel, C., Syska, C., Palero, F., Etienne, C., Industri, B., et al. (2017). Tomato root microbiota and Phytophthora parasitica-associated disease. Microbiome, 5, 56. doi:10.1186/s40168-017-0273-7


  • Joffard, N., Legendre, L., Gibernau, M., & Pascal, L. (2017). Differential Accumulation of Volatile Organic Compounds by Leaves and Roots of Two Guianese Philodendron Species, P. fragrantissimum Kunth and P. melinonii Brongn. Chemistry & Biodiversity, 14(4), e1600415. doi:10.1002/cbdv.201600415


  • Adamo, M., Voyron, S., Girlanda, M., & Marmeisse, R. (2017). RNA extraction from decaying wood for (meta)transcriptomic analyses. Canadian Journal Of Microbiology, 63(10), 841-850. doi:10.1139/cjm-2017-0230


  • Marmeisse, R., Kellner, H., Fraissinet-Tachet, L., & Luis, P. (2017). Discovering Protein-Coding Genes from the Environment: Time for the Eukaryotes? Trends In Biotechnology, 35(9), 824-835. doi:10.1016/j.tibtech.2017.02.003


  • Keshavarz-Tohid, V., Taheri, P., Muller, D., Prigent-Combaret, C., Vacheron, J., Taghavi, S. M., et al. (2017). Phylogenetic diversity and antagonistic traits of root and rhizosphere pseudomonads of bean from Iran for controlling Rhizoctonia solani. Research In Microbiology, 168(8), 760-772. doi:10.1016/j.resmic.2017.08.002

  • Kasrati, A., Alaoui Jamali, C., Spooner-Hart, R., Legendre, L., Leach, D., & Abbad, A. (2017). Chemical Characterization and Biological Activities of Essential Oil Obtained from Mint Timija Cultivated under Mineral and Biological Fertilizers. Journal Of Analytical Methods In Chemistry. Consulté de https://www.hindawi.com/journals/jamc/2017/6354532/


  • Lassalle, F., Planel, R., Penel, S., Chapulliot, D., Barbe, V., Dubost, A., et al. (2017). Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium. Genome Biology And Evolution, 9(12), 3413-3431. doi:10.1093/gbe/evx255


  • Rozier, C., Hamzaoui, J., Lemoine, D., Czarnes, S., & Legendre, L. (2017). Field-based assessment of the mechanism of maize yield enhancement by Azospirillum lipoferum CRT1. Scientific Reports, 7(1), 7416. doi:10.1038/s41598-017-07929-8


  • Lhuissier, T., Mercier, P. - E., Michalet, S., Lebot, V., & Legendre, L. (2017). Colorimetric assessment of kava (Piper methysticum Forst.) quality. Journal Of Food Composition And Analysis, 59, 27-34. doi:10.1016/j.jfca.2017.02.005
  • Petar, P., Philippe, N., & Anita, S. (2017). Nitrogenase and hydrogenase of the actinomycete Frankia: From gene expression to proteins. Journal Of Microbiology Research, 7(4), 79–92.


  • Normand, P., Van Nguyen, T., Battenberg, K., Berry, A. M., Heuvel, B. V., Fernandez, M. P., & Pawlowski, K. (2017). Proposal of'Candidatus Frankia californiensis', the uncultured symbiont in nitrogen-fixing root nodules of a phylogenetically broad group of hosts endemic to western North America. International Journal Of Systematic And Evolutionary Microbiology, 67(10), 3706-3715. doi:10.1099/ijsem.0.002147


  • Bernardin Souibgui, C., Zoropogui, A., Voisin, J., Ribun, S., Vasselon, V., Pujic, P., et al. (2017). Virulence test using nematodes to prescreen <i>Nocardia</i> species capable of inducing neurodegeneration and behavioral disorders. Peerj, 5, e3823. doi:10.7717/peerj.3823


  • Habbadi, K., Meyer, T., Vial, L., Gaillard, V., Benkirane, R., Benbouazza, A., et al. (2017). Essential oils of Origanum compactum and Thymus vulgaris exert a protective effect against the phytopathogen Allorhizobium vitis. Environmental Science And Pollution Research International, 1-10. doi:10.1007/s11356-017-1008-9


  • Zotzmann, S., Steinbrink, A., Schleich, K., Frantzmann, F., Xoumpholphakdy, C., Spaeth, M., et al. (2017). Bacterial diversity of cosmopolitan Culex pipiens and invasive Aedes japonicus from Germany. Parasitology Research, 116(7), 1899-1906. doi:10.1007/s00436-017-5466-2


  • Saucereau, Y., Valiente Moro, C., Dieryckx, C., Dupuy, J. - W., Tran, F. H., Girard, V., et al. (2017). Comprehensive proteome profiling in Aedes albopictus to decipher Wolbachia-arbovirus interference phenomenon. Bmc Genomics, 18, 635. doi:10.1186/s12864-017-3985-y


  • René-Martellet, M., Minard, G., Massot, R., Tran Van, V., Valiente Moro, C., Chabanne, L., & Mavingui, P. (2017). Bacterial microbiota associated with Rhipicephalus sanguineus (s.l.) ticks from France, Senegal and Arizona. Parasites & Vectors, 10, 416. doi:10.1186/s13071-017-2352-9


  • Dickson, L. B., Jiolle, D., Minard, G., Moltini-Conclois, I., Volant, S., Ghozlane, A., et al. (2017). Carryover effects of larval exposure to different environmental bacteria drive adult trait variation in a mosquito vector. Science Advances, 3(8), e1700585. doi:10.1126/sciadv.1700585


  • Goubert, C., Henri, H., Minard, G., Valiente Moro, C., Mavingui, P., Vieira, C., & Boulesteix, M. (2017). High-throughput sequencing of transposable element insertions suggests adaptive evolution of the invasive Asian tiger mosquito towards temperate environments. Molecular Ecology, 26(15), 3968-3981. doi:10.1111/mec.14184


  • Bertin, Y., Habouzit, C., Dunière, L., Laurier, M., Durand, A., Duchez, D., et al. (2017). Lactobacillus reuteri suppresses E. coli O157:H7 in bovine ruminal fluid: Toward a pre-slaughter strategy to improve food safety? Plos One, 12(11), e0187229. doi:10.1371/journal.pone.0187229


  • Legendre, C., Hannetel, H., Ranc, A. - G., Bezza, W., Pages, L., Vandenesch, F., et al. (2017). Listeria monocytogenes and ocular abscess: an atypical but yet potential association. International Ophthalmology, 1-8. doi:10.1007/s10792-017-0723-z


  • Marti, R., Bécouze-Lareure, C., Ribun, S., Marjolet, L., Bernardin Souibgui, C., Aubin, J. - B., et al. (2017). Bacteriome genetic structures of urban deposits are indicative of their origin and impacted by chemical pollutants. Scientific Reports, 7. doi:10.1038/s41598-017-13594-8


  • Assémien, F. L., Pommier, T., Gonnety, J. T., Gervaix, J., & Le Roux, X. (2017). Adaptation of soil nitrifiers to very low nitrogen level jeopardizes the efficiency of chemical fertilization in west african moist savannas. Scientific Reports, 7(1). doi:10.1038/s41598-017-10185-5


  • Denet, E., Coupat-Goutaland, B., Nazaret, S., Pélandakis, M., & Favre-Bonté, S. (2017). Diversity of free-living amoebae in soils and their associated human opportunistic bacteria. Parasitology Research. doi:10.1007/s00436-017-5632-6

  • Vacheron, J., Desbrosses, G., Renoud, S., Padilla-Aguilar, R. - M., Walker, V., Muller, D., & Prigent-Combaret, C. (2017). Differential contribution of plant-beneficial functions from Pseudomonas kilonensis F113 to root system architecture alterations in Arabidopsis thaliana and Zea mays. Molecular Plant-Microbe Interactions, MPMI–07. doi:10.1094/MPMI-07-17-0185-R


  • Legay, N., Piton, G., Arnoldi, C., Bernard, L., Binet, M. - N., Mouhamadou, B., et al. (2017). Soil legacy effects of climatic stress, management and plant functional composition on microbial communities influence the response of Lolium perenne to a new drought event. Plant And Soil, 1-22. doi:10.1007/s11104-017-3403-x


  • Florio, A., Pommier, T., Gervaix, J., Bérard, A., & Le Roux, X. (2017). Soil C and N statuses determine the effect of maize inoculation by plant growth-promoting rhizobacteria on nitrifying and denitrifying communities. Scientific Reports, 7(1). doi:10.1038/s41598-017-08589-4


  • Sánchez-Herrera, K., Sandoval, H., Mouniee, D., Ramírez-Durán, N., Bergeron, E., Boiron, P., et al. (2017). Molecular identification of Nocardia species using the sod A gene. New Microbes And New Infections, 19, 96-116. doi:10.1016/j.nmni.2017.03.008


  • Galia, W., Leriche, F., Cruveiller, S., Garnier, C., Navratil, V., Dubost, A., et al. (2017). Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota: interactions between microorganisms in raw meat. Bmc Genomics, 18(1), 574. doi:10.1186/s12864-017-3957-2


  • Chonova, T., Lecomte, V., Bertrand-Krajewski, J. - L., Bouchez, A., Labanowski, J., Dagot, C., et al. (2017). The SIPIBEL project: treatment of hospital and urban wastewater in a conventional urban wastewater treatment plant. Environmental Science And Pollution Research, 1-10. doi:10.1007/s11356-017-9302-0


  • Roy, M., Pozzi, A. C., Gareil, R., Nagati, M., Manzi, S., Nouioui, I., et al. (2017). Alder and the Golden Fleece: high diversity of Frankia and ectomycorrhizal fungi revealed from Alnus glutinosa subsp. barbata roots close to a Tertiary and glacial refugium. Peerj, 5, e3479. doi:10.7717/peerj.3479


  • Michalet, S., Rouifed, S., Pellassa-Simon, T., Fusade-Boyer, M., Meiffren, G., Nazaret, S., & Piola, F. (2017). Tolerance of Japanese knotweed s.l. to soil artificial polymetallic pollution: early metabolic responses and performance during vegetative multiplication. Environmental Science And Pollution Research, 1-11. doi:10.1007/s11356-017-9716-8


  • Weisser, W. W., Roscher, C., Meyer, S., Ebeling, A., Luo, G., Allan, E., et al. (2017). Biodiversity effects on ecosystem functioning in a 15-year grassland experiment: patterns, mechanisms, and open questions. Basic And Applied Ecology, 23, 1-73. doi:10.1016/j.baae.2017.06.002


  • Lemanceau, P., Blouin, M., Muller, D., & Moënne-Loccoz, Y. (2017). Let the Core Microbiota Be Functional. Trends In Plant Science, 22(7), 583-595. doi:10.1016/j.tplants.2017.04.008


  • Almario, J., Bruto, M., Vacheron, J., Prigent-Combaret, C., Moënne-Loccoz, Y., & Muller, D. (2017). Distribution of 2,4-diacetylphloroglucinol biosynthetic genes among the Pseudomonas spp. reveals unexpected polyphyletism. Frontiers In Microbiology, 8, 1218. doi:10.3389/fmicb.2017.01218


  • Hay, A. E., Boubakri, H., Buonomo, A., Rey, M., Meiffren, G., Cotin-Galvan, L., et al. (2017). Control of Endophytic Frankia Sporulation by Alnus Nodule Metabolites. Molecular Plant-Microbe Interactions, 30(3), 205-214. doi:10.1094/MPMI-11-16-0235-R


  • Barot, S., Allard, V., Cantarel, A., Enjalbert, J., Gauffreteau, A., Goldringer, I., et al. (2017). Designing mixtures of varieties for multifunctional agriculture with the help of ecology. A review. Agronomy For Sustainable Development, 37(2), 13. doi:10.1007/s13593-017-0418-x


  • Crampon, M., Cébron, A., Portet-Koltalo, F., Uroz, S., Le Derf, F., & Bodilis, J. (2017). Low effect of phenanthrene bioaccessibility on its biodegradation in diffusely contaminated soil. Environmental Pollution, 225, 663-673. doi:10.1016/j.envpol.2017.03.053


  • López-Lozano, N. E., Pereira e Silva, M. C., Poly, F., Guillaumaud, N., Van Elsas, J. D., & Salles, J. F. (2017). Denitrifying bacterial communities display different temporal fluctuation patterns across Dutch agricultural soils. Antonie Van Leeuwenhoek, 1-13. doi:10.1007/s10482-017-0898-3


  • Schwob, G., Roy, M., Manzi, S., Pommier, T., & Fernandez, Mp. (2017). Green alder (Alnus viridis) encroachment shapes microbial communities in subalpine soils and impacts its bacterial or fungal symbionts differently. Environmental Microbiology, n/a-n/a. doi:10.1111/1462-2920.13818


  • Chapalain, A., Groleau, M. - C., Le Guillouzer, S., Miomandre, A., Vial, L., Milot, S., & Déziel, E. (2017). Interplay between 4-hydroxy-3-methyl-2-alkylquinoline and N-acyl-homoserine lactone signaling in a Burkholderia cepacia complex clinical strain. Frontiers In Microbiology, 8. doi:10.3389/fmicb.2017.01021


  • Pham, H. N., Michalet, S., Bodillis, J., Nguyen, T. D., Nguyen, T. K. O., Le, T. P. Q., et al. (2017). Impact of metal stress on the production of secondary metabolites in Pteris vittata L. and associated rhizosphere bacterial communities. Environmental Science And Pollution Research, 1-16. doi:10.1007/s11356-017-9167-2

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